I let Google help me about pacfix.exe. You may want to have a read of this thread. Sounds to me like there was a bug / oversight in DOF R2 with PacLED64 and its fixed in DOF R3. Given you've just gone through the pain of loading R3, Pacfix may now be redundant. Ultimately you need to make that decision, but based on what I've read, I would run without PacFix.exe now that you've got R3.
If you drop the use of Pacfix.exe then your Launch After problem is also solved. If you want to keep it, let me know and we can modify the SampleMsgScript.vbs that ships with DOFLinx to send the message you need to DOFlinx and also run PacFix.exe. Essentially make PinballX Launch After run a script that does both.
As for DOFLinx with VP. You are correct DOFLinx will add flipper solenoid feedback via keyboard key monitoring and some under cabinet lighting. This is controlled using the flag files for tables that do not currently have DOF, usually older VP9 tables. Its not full DOF with VP9 non-DOFed tables, just an easy way to get some feedback without getting into changing the table scripting.




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